瓜类褪绿黄化病毒及其系统进化分析

【目的】检测新疆南疆7个县/市瓜类褪绿黄化病毒(Cucurbit chlorotic yellows virus, CCYV),进行系统发育分析,为新疆南疆CCYV预警和防控提供参考。【方法】于2019年,从中国新疆南疆7个县/市采集带有黄化特征的51份甜瓜叶片样品,RT-PCR进行CCYV的检测,进行特异性片段的克隆、测序和系统发育分析。【结果】中国新疆巴楚县、阿克苏市、莎车县、伽师县、疏勒县、疏附县均未检测到CCYV,而洛浦县的13份样本中,8份检出为CCYV阳性,检出率为61.53%,洛浦县CCYV特异性片段克隆测序获得了685 bp的核酸序列,与GenBank中的CCYV分离物外壳蛋白(Coat protein, CP)的一致性达到100%。所得序列与中国新疆(吐鲁番)、中国其他省、苏丹、日本、塞浦路斯、黎巴嫩的CP基因聚在I组(Group),沙特阿拉伯的分离物聚在Ⅱ组,伊朗的分离物聚在Ⅲ组。【结论】CCYV在中国新疆南疆洛浦县甜瓜产区发生,与中国新疆吐鲁番、中国其他省及周围国家的CCYV分离物亲缘关系很近,且群体遗传变异很小。     

Beaver dams,streamflow complexity,and the distribution of a rare minnow,Lepidomeda copei

Freshwater fishes are threatened globally, and often too little is known about threatened species to effectively guide their conservation. Habitat complexity is linked to fish species diversity and persistence, and degraded streams often lack habitat complexity. Beaver Castor spp., in turn, have been used to restore streams and increase habitat complexity. The northern leatherside chub Lepidomeda copei is a rare, small‐bodied, drift‐feeding minnow that has anecdotally been observed to use complex habitats associated with beaver dams in the western United States. To investigate this anecdote, we conducted fish and habitat surveys, the latter focusing on quantifying habitat complexity, in a sub‐basin of the Upper Snake River Basin in the USA. Complementary generalised linear model and path analyses revealed that northern leatherside chub occurred more often at sites with complex streamflows, and streamflows were more complex when beaver dams were present and pools were deeper. Northern leatherside chubs were also more likely to occur when temperatures were warmer, aquatic macrophytes were abundant and stream channels were narrow and deep. The linkage between chubs, complex streamflows and beaver dams needs to be evaluated more broadly to completely understand its role in the rangewide status of the species. However, it does suggests that increased use of beaver reintroductions and dam analogues for stream restoration could be a boon for the northern leatherside chub, but such efforts should be monitored to determine their effectiveness to help adapt beaver‐based restoration approaches to best benefit the species.     

5种蔷薇科树种多酚氧化酶比较基因组学分析

蔷薇科植物中有多种具有重要价值的水果,如苹果、梨、桃、草莓和黑树莓等。这些水果普遍容易发生由多酚氧化酶(PPO)介导的酶促褐变而导致重大经济损失,从全基因组角度分析比较PPO基因家族,有助于加深对PPO基因家族和功能的认识。采用比较基因组学的方法,对这5种植物的PPO基因家族进行了基因鉴定、染色体定位、编码蛋白的亚细胞定位、内含子统计分析、基因系统进化、基因倍增与丢失等特征分析。从这5种植物中,共计鉴定出了42个PPO基因,其中6个基因被认定是假基因;绝大多数基因编码的蛋白定位于叶绿体,2个定位于线粒体,3个是分泌型蛋白;PPO基因在染色体上有串联重复和散布两种形式;9个基因具有内含子,聚类结果显示可以将它们分为6个类型,每个基因类型在进化过程中都发生过基因倍增和丢失;同型基因内含子的位置和大小具有相似性。这些结果揭示蔷薇科植物PPO基因内含子是伴随着基因倍增产生的,基因倍增也是推动PPO基因多样化的重要动力,PPO基因倍增和丢失差异导致PPO基因数量在不同物种之间产生差异。     

Predicting the potential geographic distribution of Bactrocera bryoniae and Bactrocera neohumeralis(Diptera: Tephritidae) in China using MaxEnt ecological niche modeling

Bactrocera bryoniae and Bactrocera neohumeralis are highly destructive and major biosecurity/quarantine pests of fruit and vegetable in the tropical and subtropical regions in the South Pacific and Australia. Although these pests have not established in China, precautions must be taken due to their highly destructive nature. Thus, we predicted the potential geographic distribution of B. bryoniae and B. neohumeralis across the world and in particular China by ecological niche modeling of the Maximum Entropy(Max Ent) model with the occurrence records of these two species. Bactrocera bryoniae and B. neohumeralis exhibit similar potential geographic distribution ranges across the world and in China, and each species was predicted to be able to distribute to over 20% of the globe. Globally, the potential geographic distribution ranges for these two fruit fly species included southern Asia, the central and the southeast coast of Africa, southern North America, northern and central South America, and Australia. While within China, most of the southern Yangtze River area was found suitable for these species. Notably, southern China was considered to have the highest risk of B. bryoniae and B. neohumeralis invasions. Our study identifies the regions at high risk for potential establishment of B. bryoniae and B. neohumeralis in the world and in particular China, and informs the development of inspection and biosecurity/quarantine measures to prevent and control their invasions.     

Cohort‐specific variation in juvenile coho salmon habitat use

In this study, we examined summer and fall freshwater rearing habitat use by juvenile coho salmon (Oncorhynchus kisutch) in the quickly urbanising Big Lake drainage in south‐central Alaska. Habitat use was assessed by regressing fish count data against habitat survey information across thirty study sites using generalised linear mixed models. Habitat associations were examined by age‐0 and age‐1+ cohorts separately, providing an opportunity to compare habitat use across different juvenile coho salmon life stages during freshwater rearing. Regression results indicated that the age‐0 cohorts were strongly associated with shallow, wide stream reaches with in‐stream vegetation, whereas age‐1+ cohorts were associated with deeper stream reaches. Furthermore, associations between fork length and habitat characteristics suggest cohort‐specific habitat use patterns are distinct from those attributable to fish size. Habitat use information generated from this study is being used to guide optimal fish passage restoration planning in the Big Lake drainage. Evidence for habitat use partitioning by age cohort during freshwater juvenile rearing indicates that pooling age cohorts into a single “juvenile” stage for the purposes of watershed management may mask important habitat use dynamics.     

The Phytotoxicity of Various Graminicides in Durum Wheat in Greece

The effect of three herbicides, diclofop-methyl (DM), imazamethabenz-methyl (IM) and fenoxaprop-ethyl (FE), was investigated at the recommended rate (×) and double the recommended rate (2×) in a durum wheat crop. FE had the smallest effect on root system characteristics, while IM had the greatest effect. For all herbicides, the double rate treatment gave a greater statistical reduction than the single rate for root system characteristics. FE had the smallest effect on the activity of aerobic microorganisms, while DM gave the greatest reduction, 10 days after application, and all three herbicides reduced earthworm abundance. DM gave the smallest reduction in the number of tillers and in plant height, while the double rate of IM gave the greatest reduction. For all three herbicides, double the recommended rate resulted in a significant reduction in the weight of 1000 seeds, while no statistically significant deviations were noted at the recommended rate. Finally, the use of all three herbicides resulted in significantly lower statistical yields compared to the sample (control plot), although there were no significant statistical differences among them, for either recommended or double recommended rates.     

A test for interaction between brown trout (Salmo trutta) and inanga (Galaxias maculatus) in an artificial stream

Abstract –  The interaction between brown trout ( Salmo trutta ; fork length (FL) range 255–390 mm) and inanga ( Galaxias maculatus ; FL range 55–115 mm) was tested during summer through autumn in an artificial stream consisting of a single run-riffle-pool sequence with a natural food supply. Each experimental trial lasted for 15 days, and consisted of two brown trout and 50 inanga collected fresh from a nearby stream, with each species given prior residence in four replicate tests, totalling eight trials in all. In addition, two control trials (each 10 days), with 50 inanga in each, were run. Brown trout almost exclusively occupied the pool, whereas inanga occupied all habitat types, although in different proportions, when tested with and without brown trout. The proportion of inanga in the pool was appreciably lower in the experimental trials with brown trout than in the control trials with no brown trout; prior residence had no significant effect on inanga habitat use. Mortality of inanga attributable to predation by brown trout ranged from 0 to 40% with a mean of 14.5 ± 4.7%. The results suggest that habitat use and survival of inanga populations in small streams can be adversely affected by brown trout.     

含铅的多元氢阴极电催化性能的研究

用电沉积法制备Ｍｏ－Ｗ－Ｎｉ－Ｐｂ－Ｃａ多元活性阴极，研究了在０．５ｍｏｌ／Ｌ Ｈ２ＳＯ４中的析氢反应，结果表明，多元阴极具有较高的电催化活性，其析氢过电位比软钢阴极降低３０５ｍＶ，ｉ０提高三个数量级，且有较好的稳定性，并用光电子能谱研究了表面组成和结构。证实表面有：Ｎｉ，ＮｉＯ，ＭｏＯ２，ＭｏＯ＾２－４，ＷＯ３，ＰｂＯ２，ＰｂＯ，Ｃａ＾＋＋等物质。     

四种叶形吸虫的染色体组型分析

应用一种自创小型复殖吸虫染色体制备法，对四种常见寄生鱼类的叶形吸虫（中华叶形吸虫、鳗鲡叶形吸虫、鲶叶形吸虫和巴氏叶形吸虫）的染色体组型分析表明，它们的有丝分裂中期染色体二倍体数目均为２ｎ＝１８，且核型十分接近，即由四对较长的具近端着丝点染色体，四对较短的具近中部着丝点染色体及一对具中部着丝点的短染色体组成。但是，它们在染色体相对长度方面存在一定的差异。聚类分析显示，中华叶形吸虫和鳗鲡叶形吸虫，鲶叶形吸虫和巴氏叶形吸虫分别组成一近缘类群。根据发状科各属虫种的染色体组型资料，探讨了该科吸虫的核型进化问题。     

Estimating dispersibility of Acer,Fraxinus and Tilia in fragmented landscapes from patterns of seedling establishment

Relative dispersibility of Tilia americana L., Acer saccharum Marsh. and Fraxinus pennsylvanica Marsh, was inferred from the ratio among species-specific regression coefficients () computed from seedling density-distance plots. Density counts were made in spatially-uniform old fields adjacent to single seed sources or monotypic fencerows. Resultant seedling shadow curves approximate the negative exponential form expected for many seeds (log y=a–X). This basic curve shape fit species of differing dispersibility, dispersal under a range of wind directions and one-year-old or all-aged cohorts. The ratios of were 1:2.6:3.2 for Tilia, Acer and Fraxinus, respectively, in order of increasing dispersibility. Vegetation patches isolated from seed sources by several hundred meters or more should have extremely low input of seeds, especially Tilia and Acer.The finding that Fraxinus disperses farther than Acer was unexpected, since the samaras of the former have faster terminal velocities. The relationship can be explained by better performance of Fraxinus samaras in the stronger winds experienced by trees in open landscapes, poorer formation of the samara abscission layer, and release of samaras following leaf abscission and during the winter when winds are the strongest. Both the samara plan and dispersal phenology need to be considered in estimating relative dispersibility among species.